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GENOME DATA ANALYSIS MADE EASY THROUGH GRIDS

To help scientists make sense of the huge amounts of data that is churned out these days, the Genome Institute of Singapore (GIS) and Sun Microsystems are harnessing the power of high-performance computing technology.

They are establishing the Sun-GIS Centre of Excellence in Digital Biology, to allow researchers here to tap into Grid computing to solve complex problems as well as share information with other research institutes.

Said Sun Microsystems' vice-president and managing director for Asia South, Lionel Lim, "The wealth of new data available from the genomes of humans and other organisms have given rise to the need to efficiently manage that data and provide the necessary tools to analyze it."

The institute's executive director, Edison Liu, added, "Ultimately, everything that we do here is dependent on access to high-end, fast computational activities."

Much of the previous work in computational biology was performed by people trained in computer science, mathematics or statistics, working independently of the lab where the data originated.

Said GIS group leader for scientific computing, Heidi Dowst, "By creating a platform that's easy for our scientists to use, we're giving them the ability to study their own data, rather than having to rely on others."

So, for example, a scientist could collect the genetic sequences of a portion of the SARS virus, taken from various different samples. And instead of giving it to informatics experts to analyze, he could do it himself.

The new center of excellence joins a worldwide network of institutions doing groundbreaking research, including the University of Chicago, the Canadian Bioinformatics Resource and Taiwan National Cheng Kung University.

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